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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015864296.1_cds_XP_016515939.1_28231
CDS Infomation

[gene=LOC107832596] [db_xref=GeneID:107832596] [protein=probable LRR receptor-like serine/threonine-protein kinase At3g47570] [protein_id=XP_016515939.1] [location=join(16757..17629,17794..19966,20119..20465)] [gbkey=CDS]
Sequence

ATGGAGAAGCACATTTTCTTATTGATTCTTTTCTTTATATTTCAATATTACTCCATTTCA
ATATCAGCTGCTTCCTCAAATGAAACAGACCAACAAGCTCTACTAGCTTTCCAAAATCTT
GTTACAAGTCCCACTCCTTTTTTGGCCAAGGATTGGACAAGGAATACTTCTTTTTGCTCT
TGGTTTGGTGTCACTTGCAGTTCCAAAAGGCAAAGAGTTGTGGCCTTGACTCTTCCTAAT
TTGCATCTTCAAGGCAAAATTTCTCCATCTTTGGCCAATTTGTCCTTTCTCAGAGAGCTC
AATCTTGCGAACAACAACTTCCACGGCAGCATCCCTTATGGCATTGGCCACTTGCCTCGC
TTACGAGTGATTGATATTCAGAACAATCAGCTCCAAGGAAATATTCCAACAAGTCTATTT
CAACACCAGAGAGTTCAAGTAATTTCATTGGCTTTCAATAAATTCAGTGGTGAAATGTGG
AAAGGGCCATGGTATGTACCTGAACTCAGGGTCTTGGATCTCACCAACAATAGCCTCACA
GGTATAATCCCTCCTACTATTGGAAATGCCACAAGGTTGTTGAACTTCAGTTTGTCAGGG
AATGGAATCAACGGCAACATTCCAAAAGAGATTGGTAATTTAAGCCAACTTACAGAGCTT
TCCTTGACTGATAACCAATTAACAGGTTTCATTCCCGCAACAATGTTTAACATCTCATCG
CTACTTGCCATACATCTACGAAACAATAGTCTTTCTGGTCCTCTCTTGTCCGGTAAAGGG
AATATTTTGTCGAATCTGAAGTTTTTAAGTGTATCTCACAATCAAATTTCTGGTCGCATT
CCTTCCAACATTTGCCAACTCAGAGAGCTCGAATCACATAGAGGGGCCAATACCTTCAGA
AATNTACCCAAAAATATTGGTTGTTTAGCGAAGCTCGAGGAGATATATATTGGTGATAAT
CCAATAAGTGGGACTATTCCTGCTTCATTGGGCAATATTTCCACTATGCAATATCTTTCT
TGTGTAAACAGTCACATAGAGGGACCAATTCCTTCAGAAATAGGGAAGCTATCAAATTTG
AGGGAGTTAGATTTTGATTTGAATTATCTTAATGGTCAAATTCCAAAGGATATTTTTAAT
ATATCCTCTTTGGAGTTCATTGCTTTCACTTCCAACAAACTCTCAGGGAGAATTCCATCG
ACTACTGGTCTTCATCTTCCCAACCTCAAAGAAATTGTCTTGGGAGGCAATAAACTCGAA
GGGGAAATTCCTCCGCACATCATAAATGCTTCCAACATACTTCACTTAGAGCTAACTGAT
AACTTTTTCACAGGCACTATTCCTACTAATTTGGGAAATCTTCAGGAGCTGCAAGAACTA
TTGCTAAGTAATAATCAACTTACGAATGAACCAAGTGAACACGAGCTGCGATTCTTTAAT
TCTTTGGTAGATTGTAGGATGCTACGATGGCTAGAAGTGAGTTTAAATCCATTGAATGGT
GTTCTTCCCAATTCTATTGGGAATCTTTCATCTACTATTGAAATCCTTGATATAGCAGAT
GCACACATCAGTGGCCTCATCCCCAAAGGAATAGGCAATATGACCGCTCTAACAACCTTA
GACTTTCAAGGAAACAACTTCACGGGAAGTATTCCTTCTGAAGTTGGTAAGCTTAAACAG
CTCCAAGGGCTATATCTAAATAACAATAAATTACATGGGCATACTTCAGAGGTAGTATGT
AATTTATTTAATTTGGTTCAATTAGATCTGCAAGATAATGAGCTCTCTGGTGTGGTTCCA
GAATGCATAGGAAATCTTAGCATGTTACAAACGCTTTATTTGGATTCTAACAAATTTTCA
TCAATGTTTCCGCTGAGCATTTGGAAGATGAGTGGTCTTCTCTATCTAGGCGTATCACGA
AATTCAATAGAGGGACAAGTTTCACCGGATATTGGAGAACTGAAGGCCATAGTAGAACTA
GATCTTTCTGGTAACAACTTTTCGGGTATGATACCAAGCGAATTTGGTGCACTCCAAAAC
CTGAAGTCTCTTAACATATCCAACAATTCATTTTCGGGCCCAATTCCATTATCCTTTGCA
AATTTGATAAGCTTGGAATACTTGGATTTGTCTGGAAATGCCTTGTCAGGTACAATTCCT
AGGTCATTGGAAAAACTCTCATACCTAAAAAGCATCAATGTTTCATTTAATGATTTAGAA
GGTGAAATACCCAATGGTGGTATCTTTGCAACTTCCACTCCCCAATCTTTCATAGGGAAC
AAAGGTTTATGCGGAATGCACGTGTTGGAAGTTCCTGCTTGCGCTATCACCAATCCTAGA
CATCATCCAAAGTCTAAGAAACATCTGCTGAAAATTATTGTTCCAGTGGTTACTTCATCC
TTTGTGATATTCTTGTTGGCTTCAATTTGGATAATGAAACGACAGAAGAAAGAAAAGTCC
AAAGATGTAGAGAAGGTACCGGAGATTAGAACATATCAATTGGTTTCTTATTGGGAGATT
CAACGTGCAACAAATAATTTTGATGGATCAAATTTAATTGGTGTGGGAGGATCTGGCTCC
GTGTATAAAGGCACGTTATCTAGTGGAAATGTAGTAGCAATAAAGGTTCTGGATTTGCAA
AATGAGGAAGTATGCAAGAGGTTTGATACCGAATGTGAAGTGATAAGAAATGTTAGGCAT
AGAAATCTTGTCCCCGTGATTACTACTTGTTGTAGTGACTACATAAGAGCCTTTGTTCTG
CCATTTATGCCCAATGGAAGTCTTGATAATTGCTTGTACAAAGAAGATTTTCACTTGAAC
CTTGTTCAAAGAGTCATCATAATGCTTGATGTGGCTGTGGCAATTGAATACCTACATCAC
GGTCATCACACCCCCATTGTCCATTGCGACCTAAAGCCAGCCAATATTCTTTTGGATGAA
GAAATGGTGGCATATGTTAGTGATTTTGGCATCTCCAAAATTTTAGCTGTAAGCAAGTCC
ATGGCACATACTAAGACATTAGGCACTCTTGGTTACATTGCACCAGAATTTGGCTCGGAG
GGAATAGTATCTACTAGTGGTGATGTTTACAGCTACGGCATCATGTTGATGGAGGTTTTG
ACAAAAAGAAGACCAACTGATGAAGAGATATTCAATGAAAATCTTTGTTTGAGGCGGTGG
ATAAAACGAGCATTTCCAAGAACTGTGATGGAAGTTGTGGATGCCAATCTTTTTCACGAG
GGAGAGCAAATCACTTGCCAAAGTGAAATCTGCATAGCTTCCATAATAGAGTTGGCTTTA
GATTGCACAAAGGAAAAGCCAGAATCAAGGATATCCATGAAAGATGTAGTCAAGAGGCTT
AACAAAATTAAGAACACATTTTTGGAAACATAA

Peptide Sequence

PEP ID

XP_016515939.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Nicotiana tabacum]
Sequence

MEKHIFLLILFFIFQYYSISISAASSNETDQQALLAFQNLVTSPTPFLAKDWTRNTSFCS
WFGVTCSSKRQRVVALTLPNLHLQGKISPSLANLSFLRELNLANNNFHGSIPYGIGHLPR
LRVIDIQNNQLQGNIPTSLFQHQRVQVISLAFNKFSGEMWKGPWYVPELRVLDLTNNSLT
GIIPPTIGNATRLLNFSLSGNGINGNIPKEIGNLSQLTELSLTDNQLTGFIPATMFNISS
LLAIHLRNNSLSGPLLSGKGNILSNLKFLSVSHNQISGRIPSNICQLRELESHRGANTFR
NXPKNIGCLAKLEEIYIGDNPISGTIPASLGNISTMQYLSCVNSHIEGPIPSEIGKLSNL
RELDFDLNYLNGQIPKDIFNISSLEFIAFTSNKLSGRIPSTTGLHLPNLKEIVLGGNKLE
GEIPPHIINASNILHLELTDNFFTGTIPTNLGNLQELQELLLSNNQLTNEPSEHELRFFN
SLVDCRMLRWLEVSLNPLNGVLPNSIGNLSSTIEILDIADAHISGLIPKGIGNMTALTTL
DFQGNNFTGSIPSEVGKLKQLQGLYLNNNKLHGHTSEVVCNLFNLVQLDLQDNELSGVVP
ECIGNLSMLQTLYLDSNKFSSMFPLSIWKMSGLLYLGVSRNSIEGQVSPDIGELKAIVEL
DLSGNNFSGMIPSEFGALQNLKSLNISNNSFSGPIPLSFANLISLEYLDLSGNALSGTIP
RSLEKLSYLKSINVSFNDLEGEIPNGGIFATSTPQSFIGNKGLCGMHVLEVPACAITNPR
HHPKSKKHLLKIIVPVVTSSFVIFLLASIWIMKRQKKEKSKDVEKVPEIRTYQLVSYWEI
QRATNNFDGSNLIGVGGSGSVYKGTLSSGNVVAIKVLDLQNEEVCKRFDTECEVIRNVRH
RNLVPVITTCCSDYIRAFVLPFMPNGSLDNCLYKEDFHLNLVQRVIIMLDVAVAIEYLHH
GHHTPIVHCDLKPANILLDEEMVAYVSDFGISKILAVSKSMAHTKTLGTLGYIAPEFGSE
GIVSTSGDVYSYGIMLMEVLTKRRPTDEEIFNENLCLRRWIKRAFPRTVMEVVDANLFHE
GEQITCQSEICIASIIELALDCTKEKPESRISMKDVVKRLNKIKNTFLET

Transcript Sequence

Gene sequence data has not been registered.